BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H02LP1|AL427386
(681 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1274 0.0
>3x_Contig1388
Length = 8256
Score = 1274 bits (631), Expect = 0.0
Identities = 659/681 (96%)
Strand = Plus / Minus
Query: 1 atcttcggttaccgttgtaagacagtatgccagaactagagttccattggggctaactcc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3814 atcttcggttaccgttgtaagacagtttgccagaactagagttccattggggctaactcc 3755
Query: 61 agctttaggataccgttttgtttcaacgaaatgcaatgtgtcatcgaatcagtacggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3754 agctttaggataccgttttgtttcaacgaaatgcaatgtgtcatcgaatcagtacggtaa 3695
Query: 121 gatttacgaggctaagaaaaatggaccagacgcttatgagccattggatacgttccagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3694 gatttacgaggctaagaaaaatggaccagacgcttatgagccattggatacgttccagag 3635
Query: 181 acgccatttgggaccatctccttccaatktkgatcaaatkttkaaacagttkkkttacac 240
|||||||||||||||||||||||||||| | |||||||| || |||||||| ||||||
Sbjct: 3634 acgccatttgggaccatctccttccaatgtggatcaaatgttgaaacagttgggttacac 3575
Query: 241 tgatttagatcaktttatcaackgtkttktkccttaaaacattcttkttaaacktccktt 300
|||||||||||| ||||||||| || || | ||| ||||||||||| | |||| ||| ||
Sbjct: 3574 tgatttagatcagtttatcaacggtgttgtgcctgaaaacattcttgtgaaacgtccgtt 3515
Query: 301 ggaacttaattcgccagagaatgggtttacakaacaacakatgttgaaacatttggaaga 360
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 3514 ggaacttaattcgccagagaatgggtttacagaacaacagatgttgaaacatttggaaga 3455
Query: 361 acttkccaataagaataaccacaaggtcaggaatttcattgggaaagggtattacggtac 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3454 acttgccaataagaataaccacaaggtcaggaatttcattgggaaagggtattacggtac 3395
Query: 421 agtgttaccaccagtkattcagaggaatctattggaatgtccggaatggtacacttctta 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3394 agtgttaccaccagtgattcagaggaatctattggaatgtccggaatggtacacttctta 3335
Query: 481 tactccgtaccagcctgagatctcacagggcagattggaatcgcttttgaattaccagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3334 tactccgtaccagcctgagatctcacagggcagattggaatcgcttttgaattaccagac 3275
Query: 541 tgtggtgtcagatttgactgggttaccggtggccaatgcgtcgttgttggatgagggtac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3274 tgtggtgtcagatttgactgggttaccggtggccaatgcgtcgttgttggatgagggtac 3215
Query: 601 agctgctggtgaagcgatgctgttatctttcaacgttgccaagaagaagaaactcactta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3214 agctgctggtgaagcgatgctgttatctttcaacgttgccaagaagaagaaactcactta 3155
Query: 661 cgttatagataagagattgca 681
|||||||||||||||||||||
Sbjct: 3154 cgttatagataagagattgca 3134
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4112
Number of Sequences: 1807
Number of extensions: 4112
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 681
length of database: 10,358,551
effective HSP length: 16
effective length of query: 665
effective length of database: 10,329,639
effective search space: 6869209935
effective search space used: 6869209935
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.4 bits)